Best for
- Use this skill when working with Zotero libraries programmatically, managing bibliographic references, exporting citations, searching library contents, uploading PDF attachments, or building research automation workflow…
K-Dense-AI/scientific-agent-skills/skills/pyzotero/SKILL.md
Interact with Zotero reference management libraries using the pyzotero Python client. Retrieve, create, update, and delete items, collections, tags, and attachments via the Zotero Web API v3. Use this skill when working with Zotero libraries programmatically, managing bibliographic references, exporting citations, searching library contents, uploading PDF attachments, or building research automation workflows that integrate with Zotero.
Decision brief
Pyzotero is a Python wrapper for the Zotero API v3. Use it to programmatically manage Zotero libraries: read items and collections, create and update references, upload attachments, manage tags, and export citations.
Compatibility matrix
| Platform | Status | Evidence | What to check |
|---|---|---|---|
| Codex | Not declared | No explicit evidence | Portability before use |
| Claude Code | Not declared | No explicit evidence | Portability before use |
| Cursor | Not declared | No explicit evidence | Portability before use |
| Gemini CLI | Not declared | No explicit evidence | Portability before use |
Installation
The source command is displayed only when detected. A safe inspection prompt is always available so your agent can explain every action before execution.
npx skills add https://github.com/K-Dense-AI/scientific-agent-skills --skill "skills/pyzotero"Inspect the Agent Skill "pyzotero" from https://github.com/K-Dense-AI/scientific-agent-skills/blob/e7ac42510774624f327003c95b6650e2883bc01d/skills/pyzotero/SKILL.md at commit e7ac42510774624f327003c95b6650e2883bc01d. List every install step, command, network request, credential, file read/write, external action, and rollback step. Explain whether it fits my task. Do not install or execute anything until I approve.
Workflow
Required credentials — get from https://www.zotero.org/settings/keys: - User ID: shown as "Your userID for use in API calls" - API Key: create at https://www.zotero.org/settings/keys/new - Library ID: for group libraries, the integer after /groups/ in the group URL
python import os from pyzotero import Zotero
Review the “Installation” section in the pinned source before continuing.
items = zot.top(limit=10) for item in items: print(item['data']['title'], item['data']['itemType'])
results = zot.items(q='machine learning', limit=20)
Permission review
No configured static risk pattern was detected
This is not proof of safety. Runtime behavior, indirect dependencies, and hidden external systems are outside the static scan.
Evidence record
| Signal | Value | Evidence type | Meaning |
|---|---|---|---|
| Quality score | 80/100 | Computed | Documentation, specificity, maintenance, and trust rules |
| Repository stars | 31,966 | Source | Repository attention, not individual Skill quality |
| Compatibility | 0 platforms | Source | Declared in the catalog source record |
| Usage guide | automated source guide | Editorial | Generated or reviewed according to the visible evidence level |
Pinned source
Pyzotero is a Python wrapper for the Zotero API v3. Use it to programmatically manage Zotero libraries: read items and collections, create and update references, upload attachments, manage tags, and export citations.
Current upstream: pyzotero 1.13.0 (PyPI, May 2026). Docs: pyzotero.readthedocs.io.
Required credentials — get from https://www.zotero.org/settings/keys:
/groups/ in the group URLStore credentials in environment variables or a .env file:
ZOTERO_LIBRARY_ID=your_user_id
ZOTERO_API_KEY=your_api_key
ZOTERO_LIBRARY_TYPE=user # or "group"
See references/authentication.md for full setup details.
uv add pyzotero # Web API client
uv add "pyzotero[cli]" # + local CLI (Zotero 7)
uv add "pyzotero[mcp]" # + MCP server for LLM clients (Zotero 7)
import os
from pyzotero import Zotero
zot = Zotero(
library_id=os.environ['ZOTERO_LIBRARY_ID'],
library_type=os.environ.get('ZOTERO_LIBRARY_TYPE', 'user'),
api_key=os.environ['ZOTERO_API_KEY'],
)
# Retrieve top-level items (returns 100 by default)
items = zot.top(limit=10)
for item in items:
print(item['data']['title'], item['data']['itemType'])
# Search by keyword
results = zot.items(q='machine learning', limit=20)
# Retrieve all items (use everything() for complete results)
all_items = zot.everything(zot.items())
Zotero instance is bound to a single library (user or group). All methods operate on that library.item['data']. Access fields like item['data']['title'], item['data']['creators'].zot.everything(zot.items()) to get all items.True on success or raise a ZoteroError.| File | Contents |
|---|---|
| references/authentication.md | Credentials, library types, local mode |
| references/read-api.md | Retrieving items, collections, tags, groups |
| references/search-params.md | Filtering, sorting, search parameters |
| references/write-api.md | Creating, updating, deleting items |
| references/collections.md | Collection CRUD operations |
| references/tags.md | Tag access and management |
| references/files-attachments.md | File download and attachment uploads |
| references/exports.md | BibTeX, CSL-JSON, bibliography export |
| references/pagination.md | follow(), everything(), generators |
| references/full-text.md | Full-text content indexing and access |
| references/saved-searches.md | Saved search management |
| references/cli.md | Command-line interface (local Zotero 7) |
| references/mcp.md | MCP server for LLM clients (local Zotero 7) |
| references/error-handling.md | Errors and exception handling |
item = zot.item('ITEMKEY')
item['data']['title'] = 'New Title'
zot.update_item(item)
template = zot.item_template('journalArticle')
template['title'] = 'My Paper'
template['creators'][0] = {'creatorType': 'author', 'firstName': 'Jane', 'lastName': 'Doe'}
zot.create_items([template])
zot.add_parameters(format='bibtex')
bibtex = zot.top(limit=50)
# bibtex is a bibtexparser BibDatabase object
print(bibtex.entries)
zot = Zotero(library_id='123456', library_type='user', local=True)
items = zot.items()
For searching a locally running Zotero desktop app (including full-text PDF search), use the CLI or MCP server instead of the Web API. Both require Zotero 7 with local API access enabled. See references/cli.md and references/mcp.md.
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